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Installing Squidpy

Squidpy is a python package for the analysis and visualization of spatial molecular data. Squidpy requires Python version >= 3.8 to run. You can either install Squidpy using pip or conda. We will be demonstrating how to install it using conda. In order to do so, the user should have conda or miniconda installed on their system.

To install Squidpy via Conda run conda install -c conda-forge squidpy via the command line.